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Welcome to seqTools’s documentation!¶

The main repository for seqTools is located on bitbucket at https://github.com/seandavi/seqtools.

  • Using the seqtool script
    • Overview
    • Usage Examples
  • Working with VCF files
    • Somatic Variant Calling
    • Annotating VCF Files
  • Structural Variation
    • GASV on Helix/Biowulf
    • delly
  • API
    • seqtools.utils
    • seqtools.fastq
    • seqtools.varscan
    • seqtools.vcf
    • seqtools.demultiplexer
    • seqtools.strucvar

Indices and tables¶

  • Index
  • Module Index
  • Search Page

Table Of Contents

  • Welcome to seqTools’s documentation!
  • Indices and tables

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