Index

C

close() (seqtools.fastq.Fastq method)

crestLineToBedLines() (in module seqtools.strucvar.crest)

F

Fastq (class in seqtools.fastq) FastqRecord (class in seqtools.fastq), [1] fileOpen() (in module seqtools.utils)

fixLine() (in module seqtools.varscan) fixVarscanVcfFile() (in module seqtools.varscan)

N

name() (seqtools.fastq.Fastq method)

R

revcomp() (in module seqtools.utils)

S

seqtools.fastq (module) seqtools.strucvar (module) seqtools.strucvar.crest (module)

seqtools.utils (module) seqtools.varscan (module) sortVcfBySequence() (in module seqtools.utils)